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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889929.1_cds_XP_016444617.1_39655
CDS Infomation

[gene=LOC107769877] [db_xref=GeneID:107769877] [protein=LOW QUALITY PROTEIN: nucleolar protein 6-like] [exception=unclassified translation discrepancy] [protein_id=XP_016444617.1] [location=join(21194..21352,21703..21864,22747..22912,23027..23143,23229..23362,23448..23607,24785..24995,25321..25432,25576..25662,25935..26050,26427..26601,26679..26789,26872..26950,27052..27195,27283..27396,27487..27581,27583..27611,27697..27821,27993..28113,28185..28322,29221..29317,29447..29572,31066..31158,31247..31352,31491..31633,31760..31846,31928..32056)] [gbkey=CDS]
Sequence

ATGGCGTCGGATACATTAACTTACACGGACTCGATGAACTTGAAGGTGAGGGAGCTGTTG
AAGGAGGTCCAGCTCGAATACTCCCCTGAAACTACTGCAACTGTGGACAAGGTCGTCTCC
GCCATAAAAGAAGCAATTGATAAAATCCCTGAAGACCAGGTTACGGCTGACTTGGCACCA
GGGTTTGTTAGAGACATCAAAGCTGATAAGGTGGAATTCACGTTTAAGAAGCCAAAATCT
CTAGAAATTAGCGGGAGTTATTCCATACAATGCGTTACCAAACCAGATTTAAATGTGGAT
CTTTTTCTTCACTTGCCAAAGGAGTGTTTTTACGAAAAAGATTACCTAAATTATCGATAC
CATGCCAAAAGATTCCTTTATCTCTGCAAAATCAAGGAGCAGCTGAAAGAATCTCCGTTA
ATCAGAGCTGTGCGATGGTCTAGTTTCCAAAATGAGGCTCGGAAACCTATATTACTTATC
TATCCAGCAGTTAAGCTTATTGGAAATGCTGAATTTGTTGTGAGAATAATTCCTACCGCG
ACATCTTTGTTAAGTGCAACAAAACTTCGCTTGGAGCGAAACAATATCCGTACTGTCAAA
CAAGGAGATGCTTTACAAGCAACTCCAAGGTACAATAATAGTATATTGGAGGACTTGTTT
CTTGAGGATAATGCAGAATTTGTCAAAAGAACTTTCTCTGGGTGGAAAGAATTGGGGGAA
GCCTTGATACTGCTAAAAGTGTGGGCTCGGCAGAGGAGTTCAATCTATGCCCATGATTGC
TTAAATGGGTTTCTAATTTCTGTCTTATTGGCCTTCCTTGCAACAAGGCCTGGAAGGCAT
CATATAAACAGTTCCATGAATACAATGCAGATATTTCGCATCACAGTGGACTTCATCGCC
ACCTCTAAGACATGGGATAAGGGGCTTTTTATTCAGCCCCAGCCTGAAAAAGCTTCAAAC
AAGGTTTATTACTTTGCTATATTTGGTGATTACAAGTTACTTGAAGAAGATACACTTACC
AAAAAGAAGTGTGGGAGAGGCTATAAAAAGATGCATCTATGTTTCATGATTAACTCCATT
CAAAAGAGTTTCAAGGATTTAATTAAGATATTAGTTCATTCCTCCATTTTCATGTATTTT
AGGTGTCAGCATCTAAAAGCCTTGTTAGAAATGCCATTGTTCGGTCTTGGAGAACTCCCA
TCTCACTACCTAATTGTAGCGGATATGCAGTTGTTTCCTGTGGTCATTTGCAATTCATTT
GAGGACTTCAATTTGGCATTCCGTCTGTCGCACAATGGTTTCAAAGAGCTGCGCAATGAG
GCTGCATTGGCAGTTAATAGCATCAATAAATGTGAAGATGGTGGCTTTGATGAGCTTTTT
ATCACAAAGATTGACTTTCCCGCTAGATATGACTACTGCATGAGGTTGAACTTGAGGGGA
AACTGTGAAGTTTCTAGCTTAGGATTCTGCTTAGATGATGAACTTTGGAGATCTCAGGAG
CAGAAGATACTCTCCCTCATGGACCAAGGGTTGAGCGACAGATCTAAGTCCATTCGTGTT
ATTTGGAGAAACACTGCATCTGAATGCAACTTTGAAGAGGGACTGTCGGAGCTAGACAAT
GAGCCGTTGCTTATTGGGATTTCTGTCAAATCAGCAGAATCAGCCTTTAAAATGACTGTC
ATAGGTCCTAGCCCTGAGGAAAGAGATAAGGCTTTAGAATTTCGGAAGTTTTGGGGAGAA
AAGGCGACTCTTCGACAGTTTCGCGATAGTAGAATAGCTGAAGTTGCAGTATGGGAACAC
GAGGAATGGGAAAGGCATCTCATCATAAAAGATATTGCCGAGCATGTTTTGTCTAGGCAT
CTTTCCATCACCAAAGAAAAAATCGTTCCTGTTGTGGATCAACTTGATTTTTGTCTCCTC
CACAGGGATGTAGATCCTATATCATTCTCAAAAAGTTTGCTGGTGGCACTTGAAGAGCTG
TCAAAGCGTTTGCTTCAACTTAATGACATTCCACTAAAGGTGTCGACTGTGCAACCTCTG
GACTCAGCTTTCAGGATGACATCTGTCTTCCCGCCCATCCCTCATCCTTTGGCACAGGAG
AAGGGTGTTGACATAAAACTAAGGAAGCCTGTTTCAACCTGTNTGGCGTTTCTTCTCAGA
ATTGCTGAGAGTCTGCAGAACAATTGGGGGATGATGTTTACTGCTACAGAAGATGATGTA
GATGTTCTGATGTCTGGCTATGCATTCCGCCTTAAAATTTCTCATGAAAGGGCTCTAAGT
TTGGTGACTGGGCAAAGTAATAATTGTCGACATCAATGGAGCCTCTCTGCTGACAGAAAA
CTTCTTCTACGACACCAACATGCAAGCAAGATTAATGCTTTAAGGGGTCGTTATCCCGTA
TATGGACCAATTGTTCGGCTGGCTAAAAGATGGGTTTCTGCACACCTATTTTCCACGGTG
CTGACAGAGGAGGCAGTTGAACTATTGGTTTCATATCTTTTCTTGAGACCTTTGCCATTT
GAACCTACTTTCTCCCGAATAACAGGATTTTTGAGGTTCTTACGATTATTGTCAAAATAT
GATTGGGCCTTTTCACCCTTAATCGTTGATTTCGATGGCGACTTTTCGACTGAGGAGAAA
CATAAGATTATTGAGAATTTCATGAGGAGTAGAGAAGAGCATGAAAAGGATACTCAAAAT
TTAAGTCCTGCAATGTTCTTAGTTACTAAATATGACATCACATCTGAAGCATGGACAAGA
TCTTCACCAACTACAGCAGAGCTAAGAAGATTGGTGACTTATTCAACTAGCAGTGTGAAT
TTGTTGACCAAACTGATTTTGCAAGATGGATATGATTCTTATGGATGGAAATGTCTTCTC
CGCACGCCTCTGAACAACTACGATGCTGTTGTTCTTCTCCACAGGGATAAATTGCCCTAC
CCCCAGCATCTTCTCTTTCCATCCGAGCTCAAACAAGAGCGGTGTGTGGTGCGGGGGCAT
GCAACCAAGATTTTCCATCCTTTCTTTTTGCCTGGAGACTTCAAAGTGAACTATGGGGAA
CTGAAAAGTAAGCTGATGGTGAATTTTGATCCAGTAAGGTGCTTTGTTACCGATATCCAG
AGAGGATTTCCCGATGGGGTGAAGGTGTGGCACGATGCTTTGGGTGGTGATGCTCTTGGT
CTTACATTAGCAAAAGCAAGTTCAAAGAAACGAAAGCATGATGACTCGACAGAGGAGAGC
AAGGATCTTCTGATTACGCTAAAAACCATAGGCGAGGTCGGCAAAGGCCTTGTGAGAAGT
ATCCATGTTGTCAAGACCCGAAAAAGTAATAATTAA

Peptide Sequence

PEP ID

XP_016444617.1
PEP Infomation

PREDICTED: LOW QUALITY PROTEIN: nucleolar protein 6-like [Nicotiana tabacum]
Sequence

MASDTLTYTDSMNLKVRELLKEVQLEYSPETTATVDKVVSAIKEAIDKIPEDQVTADLAP
GFVRDIKADKVEFTFKKPKSLEISGSYSIQCVTKPDLNVDLFLHLPKECFYEKDYLNYRY
HAKRFLYLCKIKEQLKESPLIRAVRWSSFQNEARKPILLIYPAVKLIGNAEFVVRIIPTA
TSLLSATKLRLERNNIRTVKQGDALQATPRYNNSILEDLFLEDNAEFVKRTFSGWKELGE
ALILLKVWARQRSSIYAHDCLNGFLISVLLAFLATRPGRHHINSSMNTMQIFRITVDFIA
TSKTWDKGLFIQPQPEKASNKVYYFAIFGDYKLLEEDTLTKKKCGRGYKKMHLCFMINSI
QKSFKDLIKILVHSSIFMYFRCQHLKALLEMPLFGLGELPSHYLIVADMQLFPVVICNSF
EDFNLAFRLSHNGFKELRNEAALAVNSINKCEDGGFDELFITKIDFPARYDYCMRLNLRG
NCEVSSLGFCLDDELWRSQEQKILSLMDQGLSDRSKSIRVIWRNTASECNFEEGLSELDN
EPLLIGISVKSAESAFKMTVIGPSPEERDKALEFRKFWGEKATLRQFRDSRIAEVAVWEH
EEWERHLIIKDIAEHVLSRHLSITKEKIVPVVDQLDFCLLHRDVDPISFSKSLLVALEEL
SKRLLQLNDIPLKVSTVQPLDSAFRMTSVFPPIPHPLAQEKGVDIKLRKPVSTCXAFLLR
IAESLQNNWGMMFTATEDDVDVLMSGYAFRLKISHERALSLVTGQSNNCRHQWSLSADRK
LLLRHQHASKINALRGRYPVYGPIVRLAKRWVSAHLFSTVLTEEAVELLVSYLFLRPLPF
EPTFSRITGFLRFLRLLSKYDWAFSPLIVDFDGDFSTEEKHKIIENFMRSREEHEKDTQN
LSPAMFLVTKYDITSEAWTRSSPTTAELRRLVTYSTSSVNLLTKLILQDGYDSYGWKCLL
RTPLNNYDAVVLLHRDKLPYPQHLLFPSELKQERCVVRGHATKIFHPFFLPGDFKVNYGE
LKSKLMVNFDPVRCFVTDIQRGFPDGVKVWHDALGGDALGLTLAKASSKKRKHDDSTEES
KDLLITLKTIGEVGKGLVRSIHVVKTRKSNN

Transcript Sequence

Gene sequence data has not been registered.